Application of DNA barcodes for testing hypotheses on the role of trait conservatism and adaptive plasticity in Acer L. section Palmata Pax (Sapindaceae)

Jian Gao, Pei Chun Liao, Wan Heng Meng, Fang K. Du, Jun Qing Li

研究成果: 雜誌貢獻文章

摘要

Horticultural breeding mediates the selection of traits of interest, providing an opportunity for tracking phylogenetic potential of the trait shift. Here, we used Acer L. Sect. Palmata Pax and A. palmatum Thunb. cultivars as models to test phylogenetic signals of taxonomically relevant traits. Common chloroplast DNA barcoding markers facilitated the evaluation of genetic distance and phylogenetic relationships between these maple species. The determined short genetic distances resulted in unresolved relationships between A. palmatum cultivars and other Acer Sect. Palmata species after non-metric multidimensional scaling analysis, but was improved by discriminate analysis of principal components. However, genetic relationships among cultivars were clustered and admixed, indicating the same maternal source species for horticultural breeding. Phylogenetic reconstruction revealed an early Miocene origin for Acer Sect. Palmata. Cultivars and varieties of A. palmatum coalesced earlier than expected, indicating that the chloroplast markers cannot reflect the horticultural and breeding history of maples. Similar macroevolutionary rates of the infraspecies of A. palmatum with the species of Acer Sect. Palmata imply that the domestication and breeding process did not alter the speciation rate of this group. Nonsignificant phylogenetic signals for all the examined traits of Acer Sect. Palmata suggested that such species diversification could be explained by adaptive plasticity to paleoclimatic change. However, strong phylogenetic signals for leaf traits of infraspecies of A. palmatum suggested a phylogenetic-related trait shift during initial species divergence. Because the breeding process simulates divergent selection, we infer that genetic-based trait conservatism ensured a stable genetic basis for trait shift during initial species divergence.

原文英語
頁(從 - 到)993-1005
頁數13
期刊Revista Brasileira de Botanica
40
發行號4
DOIs
出版狀態已發佈 - 2017 十二月 1

指紋

Sapindaceae
DNA barcoding
Acer
phylogeny
Acer palmatum
breeding
testing
cultivars
genetic distance
domestication
chloroplast DNA
genetic relationships
principal component analysis
chloroplasts

ASJC Scopus subject areas

  • Plant Science

引用此文

Application of DNA barcodes for testing hypotheses on the role of trait conservatism and adaptive plasticity in Acer L. section Palmata Pax (Sapindaceae). / Gao, Jian; Liao, Pei Chun; Meng, Wan Heng; Du, Fang K.; Li, Jun Qing.

於: Revista Brasileira de Botanica, 卷 40, 編號 4, 01.12.2017, p. 993-1005.

研究成果: 雜誌貢獻文章

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abstract = "Horticultural breeding mediates the selection of traits of interest, providing an opportunity for tracking phylogenetic potential of the trait shift. Here, we used Acer L. Sect. Palmata Pax and A. palmatum Thunb. cultivars as models to test phylogenetic signals of taxonomically relevant traits. Common chloroplast DNA barcoding markers facilitated the evaluation of genetic distance and phylogenetic relationships between these maple species. The determined short genetic distances resulted in unresolved relationships between A. palmatum cultivars and other Acer Sect. Palmata species after non-metric multidimensional scaling analysis, but was improved by discriminate analysis of principal components. However, genetic relationships among cultivars were clustered and admixed, indicating the same maternal source species for horticultural breeding. Phylogenetic reconstruction revealed an early Miocene origin for Acer Sect. Palmata. Cultivars and varieties of A. palmatum coalesced earlier than expected, indicating that the chloroplast markers cannot reflect the horticultural and breeding history of maples. Similar macroevolutionary rates of the infraspecies of A. palmatum with the species of Acer Sect. Palmata imply that the domestication and breeding process did not alter the speciation rate of this group. Nonsignificant phylogenetic signals for all the examined traits of Acer Sect. Palmata suggested that such species diversification could be explained by adaptive plasticity to paleoclimatic change. However, strong phylogenetic signals for leaf traits of infraspecies of A. palmatum suggested a phylogenetic-related trait shift during initial species divergence. Because the breeding process simulates divergent selection, we infer that genetic-based trait conservatism ensured a stable genetic basis for trait shift during initial species divergence.",
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AU - Li, Jun Qing

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AB - Horticultural breeding mediates the selection of traits of interest, providing an opportunity for tracking phylogenetic potential of the trait shift. Here, we used Acer L. Sect. Palmata Pax and A. palmatum Thunb. cultivars as models to test phylogenetic signals of taxonomically relevant traits. Common chloroplast DNA barcoding markers facilitated the evaluation of genetic distance and phylogenetic relationships between these maple species. The determined short genetic distances resulted in unresolved relationships between A. palmatum cultivars and other Acer Sect. Palmata species after non-metric multidimensional scaling analysis, but was improved by discriminate analysis of principal components. However, genetic relationships among cultivars were clustered and admixed, indicating the same maternal source species for horticultural breeding. Phylogenetic reconstruction revealed an early Miocene origin for Acer Sect. Palmata. Cultivars and varieties of A. palmatum coalesced earlier than expected, indicating that the chloroplast markers cannot reflect the horticultural and breeding history of maples. Similar macroevolutionary rates of the infraspecies of A. palmatum with the species of Acer Sect. Palmata imply that the domestication and breeding process did not alter the speciation rate of this group. Nonsignificant phylogenetic signals for all the examined traits of Acer Sect. Palmata suggested that such species diversification could be explained by adaptive plasticity to paleoclimatic change. However, strong phylogenetic signals for leaf traits of infraspecies of A. palmatum suggested a phylogenetic-related trait shift during initial species divergence. Because the breeding process simulates divergent selection, we infer that genetic-based trait conservatism ensured a stable genetic basis for trait shift during initial species divergence.

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