Reexamination of the pattern of geographical disjunction of Chamaecyparis (Cupressaceae) in North America and East Asia

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Abstract

The genus Chamaecyparis (Cupressaceae) is comprised of six taxa native to East Asia and North America. Two independent lineages from eastern North America to East Asia and from western North America to East Asia have been identified from phylogenetic analyses based on variation in plastid DNA (ptDNA). However, the trees inferred from a nuclear ribosomal internal transcribed spacer (nrITS), the NEEDLY intron 2, and combined data from genetic and morphological characters of other studies are incongruent with the tree inferred from ptDNA. In this study, we sequenced the plastid matK gene as well as other sequences acquired from GenBank including the matK, rbcL, and nrITS sequences to reconstruct the phylogenetic trees of Chamaecyparis. The phylogenetic topology inferred from matK was congruent with the previous inference obtained using other ptDNA markers while the rbcL and ITS trees were congruent with previously inferred trees using the combined data and ITS sequences, respectively. Relatively less- (rbcL) and more-informative sites (ITS) may lead to different lineage sorting and incongruent phylogenetic topologies, which were evidenced by rejection of evolutionary homogeneity between ptDNA and ITS sequences in the partition homogeneity test. The phylogenetic tree reconstructed using matK and other ptDNA strongly supports the geographically disjunct distribution of Chamaecyparis in North America and East Asia. A dispersal-vicariance analysis, and geologic and fossil evidence indicated that at least two independent dispersal events occurred from North America to East Asia, which support the previous biogeographic inference by ptDNA. The use of biparental inherited markers for biogeographic inferences should be done with caution.

Original languageEnglish
Pages (from-to)511-520
Number of pages10
JournalBotanical Studies
Volume51
Issue number4
Publication statusPublished - 2010 Oct 1

Fingerprint

Chamaecyparis
Cupressaceae
plastid DNA
East Asia
phylogeny
topology
internal transcribed spacers
sorting
plastids
introns
fossils
nucleotide sequences
genetic markers

Keywords

  • Chamaecyparis
  • Geographical disjunction
  • Matk
  • Phylogenetic relationships

ASJC Scopus subject areas

  • Plant Science

Cite this

Reexamination of the pattern of geographical disjunction of Chamaecyparis (Cupressaceae) in North America and East Asia. / Liao, Pei Chun; Lin, Tsan Piao; Hwang, Shih Ying.

In: Botanical Studies, Vol. 51, No. 4, 01.10.2010, p. 511-520.

Research output: Contribution to journalArticle

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