Interpreting the Process behind Endemism in China by Integrating the Phylogeography and Ecological Niche Models of the Stachyridopsis ruficeps

Huatao Liu, Wenjuan Wang, Gang Song, Yanhua Qu, Shou Hsien Li, Jon Fjeldså, Fumin Lei

Research output: Contribution to journalArticle

24 Citations (Scopus)

Abstract

An area of endemism (AOE) is a complex expression of the ecological and evolutionary history of a species. Here we aim to address the principal drivers of avian diversification in shaping patterns of endemism in China by integrating genetic, ecological, and distributional data on the Red-headed Tree Babbler (Stachyridopsis ruficeps), which is distributed across the eastern Himalayas and south China. We sequenced two mtDNA markers from 182 individuals representing all three of the primary AOEs in China. Phylogenetic inferences were used to reconstruct intraspecific phylogenetic relationships. Divergence time and population demography were estimated to gain insight into the evolutionary history of the species. We used Ecological niche modeling to predict species' distributions during the Last Glacial Maximum (LGM) and in the present. Finally, we also used two quantitative tests, an identity test and background test to assess the similarity of ecological niche preferences between adjacent lineages. We found five primary reciprocally monophyletic clades, typically separated approximately 0.2-2.27 MYA, of which three were deeply isolated endemic lineages located in the three AOEs. All phylogroups were detected to have undergone population expansion during the past 0.3 MY. Niche models showed discontinuous habitats, and there were three barriers of less suitable habitat during the LGM and in modern times. Ecoclimatic niches may diverge significantly even over recent timescales, as each phylogroup had a unique distribution, and unique niche characteristics. Vicariant events associated with geographical and ecological barriers, glacial refuges and ecological differentiation may be the main drivers forming the pattern of endemism in China.

Original languageEnglish
Article numbere46761
JournalPloS one
Volume7
Issue number10
DOIs
Publication statusPublished - 2012 Oct 2

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Phylogeography
phylogeography
Mitochondrial DNA
China
niches
indigenous species
Ecosystem
Population
phylogeny
testing
habitats
demography
History
Demography
mitochondrial DNA
biogeography
history

ASJC Scopus subject areas

  • Biochemistry, Genetics and Molecular Biology(all)
  • Agricultural and Biological Sciences(all)
  • General

Cite this

Interpreting the Process behind Endemism in China by Integrating the Phylogeography and Ecological Niche Models of the Stachyridopsis ruficeps. / Liu, Huatao; Wang, Wenjuan; Song, Gang; Qu, Yanhua; Li, Shou Hsien; Fjeldså, Jon; Lei, Fumin.

In: PloS one, Vol. 7, No. 10, e46761, 02.10.2012.

Research output: Contribution to journalArticle

Liu, Huatao ; Wang, Wenjuan ; Song, Gang ; Qu, Yanhua ; Li, Shou Hsien ; Fjeldså, Jon ; Lei, Fumin. / Interpreting the Process behind Endemism in China by Integrating the Phylogeography and Ecological Niche Models of the Stachyridopsis ruficeps. In: PloS one. 2012 ; Vol. 7, No. 10.
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